sample	chr	startpos	endpos	nMajor	nMinor
TCGA-DX-A3LY	1	61735	15177907	2	2
TCGA-DX-A3LY	1	15177935	18243712	2	1
TCGA-DX-A3LY	1	18246041	28134195	2	2
TCGA-DX-A3LY	1	28134234	51659281	2	1
TCGA-DX-A3LY	1	51662219	121741181	2	2
TCGA-DX-A3LY	1	143285278	157492018	2	1
TCGA-DX-A3LY	1	157493419	161796094	3	1
TCGA-DX-A3LY	1	161801726	162383151	3	0
TCGA-DX-A3LY	1	162383936	189904114	3	1
TCGA-DX-A3LY	1	189906844	192319490	6	1
TCGA-DX-A3LY	1	192320243	192841037	3	1
TCGA-DX-A3LY	1	192841721	193839650	1	1
TCGA-DX-A3LY	1	193839741	194696596	3	1
TCGA-DX-A3LY	1	194707695	205324521	5	1
TCGA-DX-A3LY	1	205324567	207670623	3	1
TCGA-DX-A3LY	1	207670997	208794997	9	1
TCGA-DX-A3LY	1	208795064	220576296	3	1
TCGA-DX-A3LY	1	220577721	221604515	18	1
TCGA-DX-A3LY	1	221609163	227422190	3	1
TCGA-DX-A3LY	1	227422891	237974348	2	1
TCGA-DX-A3LY	1	237974512	238170262	6	5
TCGA-DX-A3LY	1	238170292	244311968	2	1
TCGA-DX-A3LY	1	244312527	246133388	3	1
TCGA-DX-A3LY	1	246134520	248013356	2	1
TCGA-DX-A3LY	1	248015072	248930189	2	0
TCGA-DX-A3LY	2	12784	10236566	2	1
TCGA-DX-A3LY	2	10236986	11863307	3	1
TCGA-DX-A3LY	2	11863533	13576416	2	2
TCGA-DX-A3LY	2	13576609	14994494	2	1
TCGA-DX-A3LY	2	14994585	23523591	2	2
TCGA-DX-A3LY	2	23523930	28688083	3	2
TCGA-DX-A3LY	2	28688791	34222729	3	1
TCGA-DX-A3LY	2	34223001	37581810	7	1
TCGA-DX-A3LY	2	37582004	38398633	5	1
TCGA-DX-A3LY	2	38399165	49179647	2	1
TCGA-DX-A3LY	2	49180297	57553357	3	2
TCGA-DX-A3LY	2	57553818	172699405	2	2
TCGA-DX-A3LY	2	172701405	174070047	1	1
TCGA-DX-A3LY	2	174073085	176674348	2	1
TCGA-DX-A3LY	2	176675873	179734399	1	1
TCGA-DX-A3LY	2	179734468	230374361	2	1
TCGA-DX-A3LY	2	230374942	231050320	1	1
TCGA-DX-A3LY	2	231055313	234897759	2	1
TCGA-DX-A3LY	2	234898515	240056884	3	2
TCGA-DX-A3LY	2	240061053	242147305	2	2
TCGA-DX-A3LY	3	18667	60728790	2	1
TCGA-DX-A3LY	3	60728984	72390708	2	2
TCGA-DX-A3LY	3	72390998	75420058	2	1
TCGA-DX-A3LY	3	75420342	138724813	2	2
TCGA-DX-A3LY	3	138732510	139612255	9	2
TCGA-DX-A3LY	3	139612452	142807039	4	2
TCGA-DX-A3LY	3	142809207	145267967	8	2
TCGA-DX-A3LY	3	145268051	146982590	4	2
TCGA-DX-A3LY	3	146983092	148472152	9	2
TCGA-DX-A3LY	3	148472961	148919984	4	2
TCGA-DX-A3LY	3	148920080	150965356	6	2
TCGA-DX-A3LY	3	150965483	155594689	4	2
TCGA-DX-A3LY	3	155602345	156798017	10	2
TCGA-DX-A3LY	3	156800798	159491502	6	2
TCGA-DX-A3LY	3	159493301	160441827	2	2
TCGA-DX-A3LY	3	160453506	162025794	6	2
TCGA-DX-A3LY	3	162038298	162164692	3	1
TCGA-DX-A3LY	3	162165986	162166027	11	0
TCGA-DX-A3LY	3	162168040	175316912	2	2
TCGA-DX-A3LY	3	175317515	175524717	5	2
TCGA-DX-A3LY	3	175525935	180832936	2	2
TCGA-DX-A3LY	3	180833387	181185199	8	2
TCGA-DX-A3LY	3	181195403	198169247	2	2
TCGA-DX-A3LY	4	12281	13147526	2	2
TCGA-DX-A3LY	4	13152132	13311068	7	2
TCGA-DX-A3LY	4	13312876	20842557	2	2
TCGA-DX-A3LY	4	20848138	21585000	20	2
TCGA-DX-A3LY	4	21594692	21638078	4	0
TCGA-DX-A3LY	4	21638574	36968469	2	2
TCGA-DX-A3LY	4	36978772	37065970	22	5
TCGA-DX-A3LY	4	37067314	190106768	3	2
TCGA-DX-A3LY	5	15532	1055941	6	1
TCGA-DX-A3LY	5	1058442	2330865	4	2
TCGA-DX-A3LY	5	2330932	5577312	2	2
TCGA-DX-A3LY	5	5578808	7219382	3	3
TCGA-DX-A3LY	5	7219485	13296983	2	2
TCGA-DX-A3LY	5	13298435	21565195	2	1
TCGA-DX-A3LY	5	21566512	31445963	3	2
TCGA-DX-A3LY	5	31446609	34993110	4	2
TCGA-DX-A3LY	5	34994495	46246553	3	2
TCGA-DX-A3LY	5	46246558	127399268	2	2
TCGA-DX-A3LY	5	127401752	133474187	3	2
TCGA-DX-A3LY	5	133474275	135935216	2	2
TCGA-DX-A3LY	5	135937681	147866923	4	2
TCGA-DX-A3LY	5	147875462	148658742	2	0
TCGA-DX-A3LY	5	148658761	149694158	3	2
TCGA-DX-A3LY	5	149694425	155648013	2	0
TCGA-DX-A3LY	5	155648356	157473039	2	2
TCGA-DX-A3LY	5	157474607	157788019	2	0
TCGA-DX-A3LY	5	157796927	161392183	2	2
TCGA-DX-A3LY	5	161401791	162148647	2	0
TCGA-DX-A3LY	5	162149243	163290235	3	2
TCGA-DX-A3LY	5	163294699	165438511	2	0
TCGA-DX-A3LY	5	165444149	165759167	3	2
TCGA-DX-A3LY	5	165761444	167221424	6	3
TCGA-DX-A3LY	5	167222025	176678539	5	2
TCGA-DX-A3LY	5	176678584	178931737	16	2
TCGA-DX-A3LY	5	178933871	181363319	22	2
TCGA-DX-A3LY	6	149661	65810352	2	1
TCGA-DX-A3LY	6	65812047	77310394	1	1
TCGA-DX-A3LY	6	77311119	81569947	2	1
TCGA-DX-A3LY	6	81573423	85302577	1	1
TCGA-DX-A3LY	6	85313530	94860752	3	1
TCGA-DX-A3LY	6	94861340	103753566	4	1
TCGA-DX-A3LY	6	103754140	104431489	4	3
TCGA-DX-A3LY	6	104431715	144866215	4	1
TCGA-DX-A3LY	6	144866383	164397801	5	1
TCGA-DX-A3LY	6	164397971	170741917	3	1
TCGA-DX-A3LY	7	43259	56610348	2	1
TCGA-DX-A3LY	7	56611147	69274187	3	2
TCGA-DX-A3LY	7	69276232	76066295	2	1
TCGA-DX-A3LY	7	76066721	79271169	3	2
TCGA-DX-A3LY	7	79273268	81774686	3	1
TCGA-DX-A3LY	7	81775312	93046537	2	1
TCGA-DX-A3LY	7	93049588	116868794	3	1
TCGA-DX-A3LY	7	116868879	122955884	3	0
TCGA-DX-A3LY	7	122962290	124124107	5	0
TCGA-DX-A3LY	7	124130763	125623914	2	0
TCGA-DX-A3LY	7	125626712	129297108	4	0
TCGA-DX-A3LY	7	129299309	131291055	2	0
TCGA-DX-A3LY	7	131292932	133642600	3	0
TCGA-DX-A3LY	7	133643469	134044418	1	0
TCGA-DX-A3LY	7	134044457	135421449	3	0
TCGA-DX-A3LY	7	135421688	136120941	1	0
TCGA-DX-A3LY	7	136125678	138629541	4	0
TCGA-DX-A3LY	7	138629720	144604146	2	0
TCGA-DX-A3LY	7	144606001	147595219	5	0
TCGA-DX-A3LY	7	147598550	153508405	1	0
TCGA-DX-A3LY	7	153509676	153517366	3	0
TCGA-DX-A3LY	7	153517377	153732679	6	0
TCGA-DX-A3LY	7	153737901	156400357	1	0
TCGA-DX-A3LY	7	156401370	158192892	2	0
TCGA-DX-A3LY	7	158193766	159334314	1	0
TCGA-DX-A3LY	8	81254	1475981	9	0
TCGA-DX-A3LY	8	1478691	1822296	15	0
TCGA-DX-A3LY	8	1822408	1914179	5	0
TCGA-DX-A3LY	8	1915611	3812827	4	0
TCGA-DX-A3LY	8	3812859	4458532	10	0
TCGA-DX-A3LY	8	4458956	5551876	2	0
TCGA-DX-A3LY	8	5556881	6322963	4	2
TCGA-DX-A3LY	8	6322977	14094517	2	0
TCGA-DX-A3LY	8	14095467	14185470	22	1
TCGA-DX-A3LY	8	14185706	14505421	2	0
TCGA-DX-A3LY	8	14507400	145072769	2	2
TCGA-DX-A3LY	9	46587	457931	1	0
TCGA-DX-A3LY	9	460877	26723351	1	1
TCGA-DX-A3LY	9	26723524	34247809	2	1
TCGA-DX-A3LY	9	34249653	75062029	2	2
TCGA-DX-A3LY	9	75062209	75454763	22	2
TCGA-DX-A3LY	9	75455658	138200944	2	2
TCGA-DX-A3LY	10	26823	1693425	2	1
TCGA-DX-A3LY	10	1693855	133769379	2	2
TCGA-DX-A3LY	11	198572	72860171	2	1
TCGA-DX-A3LY	11	72860230	95684129	2	2
TCGA-DX-A3LY	11	95684679	97402637	2	0
TCGA-DX-A3LY	11	97402944	97403099	3	0
TCGA-DX-A3LY	11	97403202	97527349	1	1
TCGA-DX-A3LY	11	97528271	107962231	2	2
TCGA-DX-A3LY	11	107967672	112153104	2	0
TCGA-DX-A3LY	11	112155896	113027160	2	1
TCGA-DX-A3LY	11	113027185	113824472	2	0
TCGA-DX-A3LY	11	113825931	121489492	2	2
TCGA-DX-A3LY	11	121490175	126489910	2	1
TCGA-DX-A3LY	11	126490508	132979590	2	0
TCGA-DX-A3LY	11	132980160	135074876	2	2
TCGA-DX-A3LY	12	51460	4377803	2	1
TCGA-DX-A3LY	12	4380873	5405170	19	1
TCGA-DX-A3LY	12	5407204	5594926	2	1
TCGA-DX-A3LY	12	5598057	6066759	16	1
TCGA-DX-A3LY	12	6073587	10350985	2	1
TCGA-DX-A3LY	12	10356376	10418876	9	8
TCGA-DX-A3LY	12	10420401	11895678	2	2
TCGA-DX-A3LY	12	11899768	12583461	6	1
TCGA-DX-A3LY	12	12585316	17076851	2	1
TCGA-DX-A3LY	12	17079510	17875094	6	1
TCGA-DX-A3LY	12	17880152	19728261	2	1
TCGA-DX-A3LY	12	19735611	19771107	21	2
TCGA-DX-A3LY	12	19771278	51856562	2	1
TCGA-DX-A3LY	12	51859657	52024880	14	2
TCGA-DX-A3LY	12	52026175	54195499	2	1
TCGA-DX-A3LY	12	54197359	55573234	36	2
TCGA-DX-A3LY	12	55573904	56160615	11	2
TCGA-DX-A3LY	12	56161238	56235655	3	0
TCGA-DX-A3LY	12	56246012	56302272	17	4
TCGA-DX-A3LY	12	56302937	56328276	32	0
TCGA-DX-A3LY	12	56329046	57068168	2	2
TCGA-DX-A3LY	12	57068242	57229387	1	1
TCGA-DX-A3LY	12	57236661	57343611	10	10
TCGA-DX-A3LY	12	57344703	57440076	21	0
TCGA-DX-A3LY	12	57440644	57449614	10	9
TCGA-DX-A3LY	12	57455449	57531964	3	0
TCGA-DX-A3LY	12	57539024	57587183	22	22
TCGA-DX-A3LY	12	57588032	57761439	40	0
TCGA-DX-A3LY	12	57762598	58063744	5	4
TCGA-DX-A3LY	12	58064569	58265917	2	1
TCGA-DX-A3LY	12	58270427	58765819	11	2
TCGA-DX-A3LY	12	58766697	58978800	19	4
TCGA-DX-A3LY	12	58980666	59096851	3	0
TCGA-DX-A3LY	12	59098433	59140351	15	0
TCGA-DX-A3LY	12	59142684	59462547	2	1
TCGA-DX-A3LY	12	59464192	59673694	25	3
TCGA-DX-A3LY	12	59677799	59773423	2	1
TCGA-DX-A3LY	12	59774054	59849955	1	1
TCGA-DX-A3LY	12	59852308	60333558	2	1
TCGA-DX-A3LY	12	60334097	60350660	1	0
TCGA-DX-A3LY	12	60350916	60446618	2	1
TCGA-DX-A3LY	12	60446762	60500142	3	0
TCGA-DX-A3LY	12	60501031	61218770	5	5
TCGA-DX-A3LY	12	61218881	61345019	11	0
TCGA-DX-A3LY	12	61351197	61655399	2	2
TCGA-DX-A3LY	12	61662138	62024308	25	2
TCGA-DX-A3LY	12	62024841	63895250	2	1
TCGA-DX-A3LY	12	63896548	64203590	25	2
TCGA-DX-A3LY	12	64203799	64843086	3	1
TCGA-DX-A3LY	12	64844095	64871907	21	10
TCGA-DX-A3LY	12	64871997	65810293	2	1
TCGA-DX-A3LY	12	65817767	66043085	24	3
TCGA-DX-A3LY	12	66049242	66962013	2	2
TCGA-DX-A3LY	12	66963703	66995395	14	14
TCGA-DX-A3LY	12	66995770	67401462	2	1
TCGA-DX-A3LY	12	67405665	70502152	31	2
TCGA-DX-A3LY	12	70502576	76432273	2	1
TCGA-DX-A3LY	12	76433580	76634093	11	11
TCGA-DX-A3LY	12	76635306	76672055	19	0
TCGA-DX-A3LY	12	76675425	76800210	2	1
TCGA-DX-A3LY	12	76809065	77354485	8	2
TCGA-DX-A3LY	12	77355769	125972075	2	1
TCGA-DX-A3LY	12	125974254	126050550	11	3
TCGA-DX-A3LY	12	126052123	126081824	3	3
TCGA-DX-A3LY	12	126083424	126194772	6	5
TCGA-DX-A3LY	12	126194849	126979456	2	1
TCGA-DX-A3LY	12	126981777	127302483	21	2
TCGA-DX-A3LY	12	127306588	133201603	2	1
TCGA-DX-A3LY	13	18452809	20680379	2	0
TCGA-DX-A3LY	13	20681940	21498884	2	1
TCGA-DX-A3LY	13	21502352	23104796	2	0
TCGA-DX-A3LY	13	23105630	24845038	2	2
TCGA-DX-A3LY	13	24845587	28621320	2	0
TCGA-DX-A3LY	13	28621740	30110339	2	1
TCGA-DX-A3LY	13	30110792	32595560	2	0
TCGA-DX-A3LY	13	32600088	37585119	5	2
TCGA-DX-A3LY	13	37585143	40394039	3	3
TCGA-DX-A3LY	13	40395301	44388810	6	2
TCGA-DX-A3LY	13	44389327	51126032	2	0
TCGA-DX-A3LY	13	51126325	51727600	3	3
TCGA-DX-A3LY	13	51729003	114342922	2	0
TCGA-DX-A3LY	14	18225647	106877229	2	2
TCGA-DX-A3LY	15	19811075	22646626	6	2
TCGA-DX-A3LY	15	22646840	23121972	18	2
TCGA-DX-A3LY	15	23139893	30796240	2	2
TCGA-DX-A3LY	15	30796274	30848884	7	0
TCGA-DX-A3LY	15	30855973	30941861	5	0
TCGA-DX-A3LY	15	30943154	31598147	22	2
TCGA-DX-A3LY	15	31604809	101928837	2	2
TCGA-DX-A3LY	16	10777	36048855	2	2
TCGA-DX-A3LY	16	46429870	90221127	2	1
TCGA-DX-A3LY	17	150733	83090856	2	2
TCGA-DX-A3LY	18	48133	43180847	2	2
TCGA-DX-A3LY	18	43181026	43293796	5	0
TCGA-DX-A3LY	18	43301101	43669275	20	2
TCGA-DX-A3LY	18	43671105	45290386	2	2
TCGA-DX-A3LY	18	45291603	45362648	20	0
TCGA-DX-A3LY	18	45364911	51691887	2	2
TCGA-DX-A3LY	18	51692315	51821378	23	4
TCGA-DX-A3LY	18	51821907	64849407	2	2
TCGA-DX-A3LY	18	64849672	64870365	19	18
TCGA-DX-A3LY	18	64876809	64965223	16	5
TCGA-DX-A3LY	18	64968194	80257174	2	2
TCGA-DX-A3LY	19	90910	58586487	2	2
TCGA-DX-A3LY	20	80664	2560055	4	1
TCGA-DX-A3LY	20	2560438	3535277	2	0
TCGA-DX-A3LY	20	3536137	4105916	6	1
TCGA-DX-A3LY	20	4109643	4749717	1	0
TCGA-DX-A3LY	20	4749913	7993651	2	1
TCGA-DX-A3LY	20	7996933	8379387	4	1
TCGA-DX-A3LY	20	8383207	11502137	2	1
TCGA-DX-A3LY	20	11508671	12251060	6	1
TCGA-DX-A3LY	20	12254973	12644444	1	0
TCGA-DX-A3LY	20	12646518	13804574	6	1
TCGA-DX-A3LY	20	13807408	15199174	2	1
TCGA-DX-A3LY	20	15199535	16135086	6	1
TCGA-DX-A3LY	20	16135545	17187397	2	1
TCGA-DX-A3LY	20	17191309	21581517	1	1
TCGA-DX-A3LY	20	21582339	22984120	2	1
TCGA-DX-A3LY	20	22984317	25574577	1	1
TCGA-DX-A3LY	20	25576790	42334475	2	1
TCGA-DX-A3LY	20	42334656	64324800	2	2
TCGA-DX-A3LY	21	10336543	22893544	2	1
TCGA-DX-A3LY	21	22894101	23401539	5	1
TCGA-DX-A3LY	21	23404440	42487718	2	1
TCGA-DX-A3LY	21	42492837	43201650	4	1
TCGA-DX-A3LY	21	43202361	46677045	2	1
TCGA-DX-A3LY	22	15294545	50796027	2	2
TCGA-DX-A3LY	X	251810	2785592	2	2
TCGA-DX-A3LY	X	2785914	76391988	2	0
TCGA-DX-A3LY	X	76396629	77141836	0	0
TCGA-DX-A3LY	X	77158193	79557465	2	0
TCGA-DX-A3LY	X	79559096	80016172	0	0
TCGA-DX-A3LY	X	80017960	81600889	2	0
TCGA-DX-A3LY	X	81601061	82124189	4	0
TCGA-DX-A3LY	X	82140813	82287006	1	0
TCGA-DX-A3LY	X	82287474	82794649	5	0
TCGA-DX-A3LY	X	82796190	85903831	19	0
TCGA-DX-A3LY	X	85907356	102161070	1	0
TCGA-DX-A3LY	X	102163823	102163823	4	0
TCGA-DX-A3LY	X	102163913	102565760	17	0
TCGA-DX-A3LY	X	102568094	103535664	9	0
TCGA-DX-A3LY	X	103538037	103945080	4	0
TCGA-DX-A3LY	X	103948285	104129339	1	0
TCGA-DX-A3LY	X	104129360	104210034	5	0
TCGA-DX-A3LY	X	104210203	104277480	4	0
TCGA-DX-A3LY	X	104281730	104281730	14	0
TCGA-DX-A3LY	X	104282069	104372417	9	0
TCGA-DX-A3LY	X	104377304	105541866	21	0
TCGA-DX-A3LY	X	105542039	105572410	5	0
TCGA-DX-A3LY	X	105574709	152999335	1	0
TCGA-DX-A3LY	X	152999587	156004181	22	0
